Search results for "Genome reduction"

showing 10 items of 13 documents

Settling Down: The Genome of Serratia symbiotica from the Aphid Cinara tujafilina Zooms in on the Process of Accommodation to a Cooperative Intracell…

2014

Particularly interesting cases of mutualistic endosymbioses come from the establishment of co-obligate associations of more than one species of endosymbiotic bacteria. Throughout symbiotic accommodation from a free-living bacterium, passing through a facultative stage and ending as an obligate intracellular one, the symbiont experiences massive genomic losses and phenotypic adjustments. Here, we scrutinized the changes in the coevolution of Serratia symbiotica and Buchnera aphidicola endosymbionts in aphids, paying particular attention to the transformations undergone by S. symbiotica to become an obligate endosymbiont. Although it is already known that S. symbiotica is facultative in Acyrt…

SerratiaGenomeaphid endosymbiont03 medical and health sciencesBuchneraBotanyGeneticsAnimalsriboflavingenome reductionSymbiosisPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyGene RearrangementGenetics0303 health sciencesFacultativeAphidbiologyObligate030306 microbiologyHost (biology)food and beveragesSerratia symbioticabiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumBuchnera aphidicolaAphidsMobile genetic elementsco-obligateBuchneraResearch ArticleGenome Biology and Evolution
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Testing the Domino Theory of Gene Loss in Buchnera aphidicola: The Relevance of Epistatic Interactions

2018

The domino theory of gene loss states that when some particular gene loses its function and cripples a cellular function, selection will relax in all functionally related genes, which may allow for the non-functionalization and loss of these genes. Here we study the role of epistasis in determining the pattern of gene losses in a set of genes participating in cell envelope biogenesis in the endosymbiotic bacteria Buchnera aphidicola. We provide statistical evidence indicating pairs of genes in B. aphidicola showing correlated gene loss tend to have orthologs in Escherichia coli known to have alleviating epistasis. In contrast, pairs of genes in B. aphidicola not showing correlated gene loss…

0301 basic medicinemedicine.disease_causeGenomeGeneral Biochemistry Genetics and Molecular BiologyArticlegene interactions03 medical and health sciencesmedicinecorrelated evolutionlcsh:Sciencegenome reductionEscherichia coliGeneEcology Evolution Behavior and SystematicsGeneticsbiologyPaleontologybiology.organism_classification030104 developmental biologySpace and Planetary Scienceendosymbiotic bacteriaProteomeEpistasislcsh:QBuchneraBiogenesisFunction (biology)Life
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Solving a Bloody Mess: B-Vitamin Independent Metabolic Convergence among Gammaproteobacterial Obligate Endosymbionts from Blood-Feeding Arthropods an…

2015

Endosymbiosis is a common phenomenon in nature, especially between bacteria and insects, whose typically unbalanced diets are usually complemented by their obligate endosymbionts. While much interest and focus has been directed toward phloem-feeders like aphids and mealybugs, blood-feeders such as the Lone star tick (Amblyomma americanum), Glossina flies, and the human body louse (Pediculus humanus corporis) depend on obligate endosymbionts which complement their B-vitamin-deficient diets, and thus are required for growth and survival. Glossiphoniid leeches have also been found to harbor distinct endosymbionts housed in specialized organs. Here, we present the genome of the bacterial endosy…

leech endosymbiontDNA BacterialMolecular Sequence DataZoologyblood-feederProvidenciaBiologyProvidencia siddalliiAmblyomma americanum03 medical and health sciencesSymbiosisLeechesRNA Ribosomal 16SBotanyGammaproteobacteriaGeneticsAnimalsHumansgenome reductionSymbiosisEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology2. Zero hunger0303 health sciencesEndosymbiosisObligate030306 microbiologyHost (biology)DipterafungiVitaminsbiochemical phenomena metabolism and nutritionbiology.organism_classificationB vitaminsCandidatusB-vitaminbacteriaHaementeria officinalisGammaproteobacteriaGenome BacterialResearch ArticleGenome Biology and Evolution
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To B or Not to B: Comparative Genomics Suggests

2018

Insect lineages feeding on nutritionally restricted diets such as phloem sap, xylem sap, or blood, were able to diversify by acquiring bacterial species that complement lacking nutrients. These bacteria, considered obligate/primary endosymbionts, share a long evolutionary history with their hosts. In some cases, however, these endosymbionts are not able to fulfill all of their host's nutritional requirements, driving the acquisition of additional symbiotic species. Phloem-feeding members of the insect family Aleyrodidae (whiteflies) established an obligate relationship with Candidatus Portiera aleyrodidarum, which provides its hots with essential amino acids and carotenoids. In addition, ma…

fungiArsenophonuswhiteflybiochemical phenomena metabolism and nutritionriboflavinvitaminsgenome reductionMicrobiologysymbiosisWolbachiaOriginal Researchmetabolic complementationFrontiers in microbiology
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To B or Not to B: Comparative Genomics Suggests Arsenophonus as a Source of B Vitamins in Whiteflies

2018

Insect lineages feeding on nutritionally restricted diets such as phloem sap, xylem sap, or blood, were able to diversify by acquiring bacterial species that complement lacking nutrients. These bacteria, considered obligate/primary endosymbionts, share a long evolutionary history with their hosts. In some cases, however, these endosymbionts are not able to fulfill all of their host's nutritional requirements, driving the acquisition of additional symbiotic species. Phloem-feeding members of the insect family Aleyrodidae (whiteflies) established an obligate relationship with Candidatus Portiera aleyrodidarum, which provides its hots with essential amino acids and carotenoids. In addition, ma…

0301 basic medicineMicrobiology (medical)food.ingredientPseudogeneRiboflavin[SDV]Life Sciences [q-bio]030106 microbiologyArsenophonuslcsh:QR1-502GenomeMicrobiologylcsh:Microbiology03 medical and health sciencesMetabolic complementationfooda section of the journal Frontiers in Microbiology whiteflywhiteflyriboflavinSymbiosisgenome reductionGeneticsComparative genomicsGenome reductionbiologyObligatefungiVitaminsbiochemical phenomena metabolism and nutritionbiology.organism_classificationvitaminsWhiteflysymbiosismetabolic complementationB vitamins030104 developmental biologyAleurodicus dispersusWolbachiaThis article was submitted to Evolutionary and Genomic MicrobiologyArsenophonusWolbachiaFrontiers in Microbiology
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Genome Economization in the Endosymbiont of the Wood Roach Cryptocercus punctulatus Due to Drastic Loss of Amino Acid Synthesis Capabilities

2011

Cockroaches (Blattaria: Dictyoptera) harbor the endosymbiont Blattabacterium sp. in their abdominal fat body. This endosymbiont is involved in nitrogen recycling and amino acid provision to its host. In this study, the genome of Blattabacterium sp. of Cryptocercus punctulatus (BCpu) was sequenced and compared with those of the symbionts of Blattella germanica and Periplaneta americana, BBge and BPam, respectively. The BCpu genome consists of a chromosome of 605.7 kb and a plasmid of 3.8 kb and is therefore approximately 31 kb smaller than the other two aforementioned genomes. The size reduction is due to the loss of 55 genes, 23 of which belong to biosynthetic pathways for amino acids. The …

0106 biological sciencesMaleMolecular Sequence DataCockroachesBiology010603 evolutionary biology01 natural sciences03 medical and health scienceschemistry.chemical_compoundBlattabacteriumGenome SizeValineGeneticsEndophytesAnimalsAmino Acidsgenome reductionGenome sizeEcology Evolution Behavior and SystematicsAmino acid synthesisResearch Articles030304 developmental biology2. Zero hungerchemistry.chemical_classificationGenetics0303 health sciencesBlattabacteriumMethionineBacteroideteswood-feedingbiology.organism_classificationsymbiosisAmino acidchemistryBiochemistrymetabolic pathway lossFemaleIsoleucineLeucineGenome BacterialGenome Biology and Evolution
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Genome Evolution in the Primary Endosymbiont of Whiteflies Sheds Light on Their Divergence

2015

International audience; Hemipteran insects are well-known in their ability to establish symbiotic relationships with bacteria. Among them, heteropteran insects present an array of symbiotic systems, ranging from the most common gut crypt symbiosis to the more restricted bacteriome-associated endosymbiosis, which have only been detected in members of the superfamily Lygaeoidea and the family Cimicidae so far. Genomic data of heteropteran endosymbionts are scarce and have merely been analyzed from the Wolbachia endosymbiont in bed bug and a few gut crypt-associated symbionts in pentatomoid bugs. In this study, we present the first detailed genomic analysis of a bacteriome-associated endosymbi…

Nonsynonymous substitutionMutation rateGenome evolution[SDV]Life Sciences [q-bio]Lineage (evolution)divergence timecomparative genomicsPortieraBiologyGenomeEvolution MolecularHemipterataxonomyMolecular evolutionwhitefliesGeneticsAnimalsSymbiosisgenome reductionCladeEcology Evolution Behavior and SystematicsComparative genomicsGeneticsendosymbiosisamino acid biosynthesismolecular evolutiongenome stasisfungiGenomicsbiochemical phenomena metabolism and nutritionLygaeoideaHalomonadaceaebacteriametabolismendosymbiontGenome BacterialResearch ArticleGenome Biology and Evolution
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The evolutionary history of symbiotic associations among bacteria and their animal hosts: a model

2009

AbstractA model to explain the evolutionary history of animal-bacteria obligatory mutualistic symbiosis is presented. Dispensability of genes and genetic isolation are key factors in the reduction process of these bacterial genomes. Major steps in such genome reductive evolution, leading towards primary endoslmblosis, and the possibility of complementation or replacement by a secondary symbiont are also indicated. Yet, we need to understand what happens at the beginning of the adaptative process towards an obligate mutualistic relationship. For this purpose, we propose to sequence the complete genome of SOPE, the primary endosymbiont of the rice weevil.

Microbiology (medical)Bacterial genome sizeBiologyreplacementBacterial Physiological PhenomenaGenomeEvolution MolecularAnimalsgenome reductionSymbiosisGeneSequence DeletionGeneticsendosymbiosisComplementationBacteriaObligateEndosymbiosisGeneral Medicinebiology.organism_classificationSOPE (Sitophilus oryzae primary endorsement)ComplementationInfectious DiseasesWeevilsGenetic isolateGene DeletionGenome BacterialBacteriaClinical Microbiology and Infection
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Endosymbiont communities in Bemisia tabaci: a metagenomic approach

2014

Este trabajo es parte de un programa de investigación que tiene como objetivo dilucidar la evolución de las bacterias endosimbiontes utilizando los consorcios insecto-bacteria como modelo. Los diferentes estudios realizados sobre los insectos y sus bacterias endosimbiontes han arrojado luz sobre los cambios ocurridos tras la adquisición de una forma de vida intracelular, así cómo la interacción entre diferentes endosimbiontes formando comunidades endosimbioticas. Dos son los objetivos principales de este trabajo. El primera (capítulos “Portiera y su socio Hamiltonella” y “El tercer pasajero: Cardinium cBtQ1)” trata de analizar y describir las relaciones de la comunidad endosimbiótica en B. …

Hamiltonella defensa:CIENCIAS DE LA VIDA::Simbiosis [UNESCO]endosymbiosismolecular evolutiongenome stasisUNESCO::CIENCIAS DE LA VIDA::Simbiosisdivergence timecomparative genomicsCardinium hertigii:CIENCIAS DE LA VIDA::Microbiología ::Metabolismo bacteriano [UNESCO]Portiera aleyrodidarumwhitefliesPortiera ultraestructureUNESCO::CIENCIAS DE LA VIDA::Microbiología ::Metabolismo bacterianogliding motilitygenome reductioninsect symbiosismetabolism
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Comparative Genomics of Blattabacterium cuenoti: The Frozen Legacy of an Ancient Endosymbiont Genome

2013

Many insect species have established long-term symbiotic relationships with intracellular bacteria. Symbiosis with bacteria has provided insects with novel ecological capabilities, which have allowed them colonize previously unexplored niches. Despite its importance to the understanding of the emergence of biological complexity, the evolution of symbiotic relationships remains hitherto a mystery in evolutionary biology. In this study, we contribute to the investigation of the evolutionary leaps enabled by mutualistic symbioses by sequencing the genome of Blattabacterium cuenoti, primary endosymbiont of the omnivorous cockroach Blatta orientalis, and one of the most ancient symbiotic associa…

NitrogenCockroachesGenomenitrogen metabolismEvolution MolecularBlattabacteriumSymbiosisMastotermes darwiniensisPhylogeneticsGeneticsAnimalsSymbiosisBlattabacterium endosymbiontgenome reductionEcology Evolution Behavior and SystematicsPhylogenyComparative genomicsureasebiologyBase SequenceEcologyBacteroidetesBlattafungiPan-genomebiology.organism_classificationEvolutionary biologyBlatta orientalispan-genomeGenome BacterialMetabolic Networks and PathwaysResearch Article
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